Browsing by Subject "Triticale"

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Differences in yield performance and yield stability between hybrids and inbred lines of wheat, barley, and triticale
(2015) Mühleisen, Jonathan; Reif, Jochen Christoph
Hybrids of wheat, barley, and triticale are expected to possess higher yield performance and yield stability compared to inbred lines. Assessment of yield performance as well as yield stability requires the evaluation of genotypes in plot-based yield trials across multiple environments. Evaluation of genotypes under stress conditions can be associated with increased field heterogeneity, which may result in imprecise estimates of genotypic values. The assessment of yield stability requires intensive testing in many environments, and it would be interesting to know how many test environments are required to reliably estimate yield stability. The key objectives of the present thesis were to (1) investigate optimal strategies to analyze field trials with high error variance due to spatially varying drought stress, (2) identify the required number of test environments to precisely estimate yield stability of individual barley genotypes, and (3) examine yield performance and yield stability of wheat, barley, and triticale hybrids and lines. Drought stress at two locations of a winter triticale trial caused increased field heterogeneity, resulting in lower heritabilities compared to the four non-stress locations. It was found that heritability could be increased by modeling incomplete block and row effects, by using visual scorings of drought stress intensity as covariates in an analysis of covariance, and by modeling a spatial covariance between adjacent plots. The most suitable model can be identified using the Akaike Information Criterion. In addition, it has to be ensured that the covariate is independent from genotypic effects and that it is linearly related with the response variable. Dynamic yield stability of genotypes was frequently found to depend strongly on the specific set of test environments. When the genotypes were evaluated in different environments, e.g. in the following year, the ranking in yield stability could be different. This would result in a low heritability. Theoretical assumptions and empirical studies showed that heritability can be increased when the number of test environments is increased. Five series of barley registration trials with a reduced number of 16 to 27 genotypes evaluated in 39 to 45 environments were used to investigate the relationship between magnitude of heritability of yield stability and number of test environments. Based on a cross-validation approach, it was found, that at least 40 test environments should be used to obtain a heritability of 0.5. Magnitude of heritability, however, varied strongly within and between series. Therefore, depending on the respective set of environments and genotypes, more or less test environments can be needed. Yield performance of wheat hybrids produced using chemical hybridizing agents (CHA) or cytoplasmic male sterility (CMS) was well investigated in other studies reporting around 10% midparent heterosis for grain yield. In the present thesis, CMS-based barley hybrids were compared with parental inbred lines and unrelated commercial inbred lines in breeding and registration trials. Midparent heterosis was around 10%. The comparison with commercial inbred lines in the registration trials revealed that hybrids could compete with and partially surpass outstanding inbred lines. Triticale hybrids, produced using CMS, were evaluated for grain yield at up to 20 environments with their parents and commercial inbred lines. Midparent heterosis amounted to 3% and no hybrid outyielded the best inbred line. The low yield performance of triticale hybrids is probably associated with CMS-system, since CHA-based triticale hybrids showed a midparent heterosis around 10% in early studies, which is comparable to the midparent heterosis found in wheat and barley. Yield stability of CHA-based wheat as well as CMS-based hybrids of barley and triticale was compared with yield stability of parental and commercial inbred lines on group level. The wheat and barley hybrids showed on average significantly higher dynamic yield stability compared to inbred lines, but the triticale hybrids did not. In the barley registration trials, hybrids had the highest dynamic yield stability on average. The CMS-based triticale hybrids, however, showed on average significantly lower dynamic yield stability as their female parents and the commercial inbred lines across 20 environments. In conclusion, hybrids of wheat and barley possessed an increased yield potential as well as an enhanced dynamic yield stability. In contrast, the CMS-based triticale hybrids showed only marginal yield advantages coupled with low dynamic yield stability. Further research is required to increase economical competitiveness of hybrids in all three crops, to identify and eliminate the reasons for poor performance of CMS-based triticale hybrids and to investigate the suitability of dynamic yield stability measures to identify vigorous and stress tolerant genotypes.
Genetische und physiologische Einflußfaktoren sowie deren Wechselwirkungen auf die Trichothecenbildung bei Roggen, Triticale und Weizen nach Inokulation mit Fusarium culmorum (W. G. Sm.) Sacc.
(2002) Reinbrecht, Carsten; Geiger, Hartwig H.
Fusarium culmorum causes specific hazards of cereal quality by the producion of trichothecenes. Prophylaxis by plant breeding can be highly effective. The aim of this study was to investigate the accumulation of trichothecenes in cereals with regard to host and fungal genotype, to physiological factors and the resulting interactions. To determine the effects of 6 environments (E), 2 inoculation dates (ID), 2 fungal isolates (I), and 5 conidia concentrations (C) and their interactions, field trials with up to 12 rye, 6 triticale, and 8 wheat genotypes (G) were conducted in 1995-1997. Kinetics of trichothecene in the heads were described with 6 harvest dates (H) in 2 host genotypes each. In a growth chamber, 2 levels of temperature (T) and 2 of relative humidity (R) were investigated by using 2 host genotypes each. Average deoxynivalenol (DON) accumulation of rye, triticale, and wheat was 41, 46, and 82 mg kg-1, respectively. Genotypes differed significantly in rye and wheat. In all cereal species, GxE interactions were important. In wheat, DON content was highly correlated to all resistance traits, whereas in rye only a tight correlation existed to the relative specific grain weight. In triticale and wheat, inoculation at full anthesis resulted in higher DON contents than inoculation at heading. In rye, no effect of inoculation date was found. In contrast, GxID interaction was significant in rye. The nivalenol (NIV) producing isolate led to lower trichothecene contents than the DON producing isolate. This effect was found to be significant only in rye and triticale. Significant GxI interactions occurred in wheat only. Even one week after inoculation, considerable DON concentrations could be obtained in harvested heads, especially in wheat. Maximum DON contents were observed between 3 and 6 weeks after inoculation (in wheat: partially above 300 mg kg-1). NIV contents were always lower than DON contents. Until full ripening, DON contents slightly decreased, whereas NIV contents increased continuously. HxE and HxI interactions were most important. Trichothecene content in chaff and spindles was 2-4 fold higher than in the respective kernels at 6 and 8 weeks after inoculation. With higher conidia concentrations, increasing contents of DON+3-Acetyl-DON were measured. GxC interactions were highly significant. Highest heritabilities were found in the upper concentration levels. When the relative humidity was high, trichothecene concentrations of kernels were superior. With the temperature, an inverse effect was obtained. It seems that GxT interaction contributed most to GxE in rye and wheat, in triticale also the GxR interaction. In conclusion, assisting resistance traits may replace an expensive quantification of trichothecenes in early generations. In advanced generations, tests should be conducted in several environments with high conidia concentrations, and a toxin analysis should be carried out directly.
Genomic and phenotypic improvement of triticale (×Triticosecale Wittmack) line and hybrid breeding programs
(2021) Trini, Johannes Philipp; Würschum, Tobias
Triticale (×Triticosecale Wittmack) breeding is a success story as it evolved to a serious alternative in farmer’s crop rotations since the 1970s and is grown globally on around 4 million hectares today. New developments, however, pointed out additional possibilities to improve triticale line and hybrid breeding programs increasing its future competitiveness and were evaluated in this study. In more detail, these were to (i) examine the genetic control and evaluate long term genetic trends of plant height in Central European winter triticale, (ii) evaluate the potential of triticale hybrid breeding and hybrid prediction approaches in triticale with a focus on biomass yield, (iii) introduce and examine a concept bypassing the time and resource consuming evaluation of female candidate lines in cytoplasmatic male sterility (CMS) based hybrid breeding, and (iv) to draw conclusions for the future improvement of triticale line and hybrid breeding programs. The genome wide association study detected markers significantly associated with plant height and developmental stage, respectively. These explained 42,16% and 29,31% of the total genotypic variance of plant height and development stage and are probably related to four and three quantitative trait loci (QTL), respectively. The two major QTL detected for plant height were located on chromosomes 5A and 5R which most likely could be assigned to the known height reducing genes Rht12 from wheat and Ddw1 from rye. The third major QTL detected located on chromosome 4B could not be assigned to a known height reducing gene and it cannot be precluded, that these significantly associated markers are identifying one and the same QTL as the markers located on chromosome 5R, as these showed a high linkage disequilibrium amongst each other. Evaluating the 129 registered cultivars showed that plant height decreased since the 1980’s. Evaluating their genetic constitution revealed that most cultivars carried at least one height reducing QTL and that plant height could be reduced even further in cultivars combining more than one height reducing QTL. It was further observed that the frequency of cultivars carrying one or a combination of height reducing QTL increased since the 1980’s. A considerable amount of heterosis has been observed for biomass related traits in triticale hybrids before. However, the use of hybrid prediction approaches for these traits has not been evaluated. Hybrid prediction based on mid parent values already showed very good results illustrating their potential to preselect the most promising parents as prediction accuracies based on parental general combining ability (GCA) effects were only slightly better. When incorporating molecular markers into GCA based prediction accuracies, prediction accuracies decreased slightly compared to prediction accuracies solely based on phenotypic GCA effects. Predicting hybrids incorporating one or two untested parental lines, imitating a scenario where novel female and/or male candidate lines are introduced into a hybrid breeding program, reduced genomic prediction accuracies even further due to the decreasing amount of information which could be exploited from the parents. Additionally including specific combining ability (SCA) effects in the genomic prediction models did not yield additional use. A high proportion of SCA variance compared to the total genetic variance decreased prediction accuracies for the traits fresh and dry biomass yield. In this study simulation studies were used to demonstrate what a prediction accuracy of a specific value actually means for a hybrid breeding programs. Further, an approach was introduced and evaluated showing great potential to evaluate novel female candidate lines for their use in a CMS based hybrid breeding program by bypassing their time and resource demanding introgression into a male sterile cytoplasm using three way hybrids. Prediction accuracies obtained by this novel approach showed highly promising results for most evaluated traits compared to prediction accuracies based on GCA effects or mid parent performance. Additionally incorporating SCA effects into the prediction models showed only a little increase of the prediction accuracies. Further, the results were supported by simulation studies adjusting different parameters, such as the number of parents or the proportion of SCA variance compared to the total genetic variance.
Genomics-assisted breeding strategies for quantitative resistances to Northern corn leaf blight in maize (Zea mays L.) and Fusarium diseases in maize and in triticale (× Triticosecale Wittm.)
(2021) Galiano Carneiro, Ana Luísa; Miedaner, Thomas
Fusarium head blight (FHB) in triticale (× Triticosecale Wittm.), Gibberella ear rot (GER) and Northern corn leaf blight (NCLB) in maize (Zea mays L.) are devastating crop diseases causing yield losses and/or reducing grain quality worldwide. Resistance breeding is the most efficient and sustainable approach to reduce the damages caused by these diseases. For all three pathosystems, a quantitative inheritance based on many genes with small effects has been described in previous studies. Hence, this thesis aimed to assess the potential of genomics-assisted breeding strategies to reduce FHB, GER and NCLB in applied breeding programs. In particular, the objectives were to: (i) Dissect the genetic architecture underlying quantitative variation for FHB, GER and NCLB through different quantitative trait loci (QTL) and association mapping approaches; (ii) assess the potential of genomics-assisted selection to select superior triticale genotypes harboring FHB resistance; (iii) phenotype and characterize Brazilian resistance donors conferring resistance to GER and NCLB in multi-environment trials in Brazil and in Europe; and (iv) evaluate approaches for the introgression and integration of NCLB and GER resistances from tropical to adapted germplasm. The genome-wide association study (GWAS) conducted for FHB resistance in triticale revealed six QTL that reduced damages by 5 to 8%. The most prominent QTL identified in our study was mapped on chromosome 5B and explained 30% of the genotypic variance. To evaluate the potential of genomic selection (GS), we performed a five-fold cross-validation study. Here, weighted genomic selection increased the prediction accuracy from 0.55 to 0.78 compared to the non-weighted GS model, indicating the high potential of the weighted genomic selection approach. The successful application of GS requires large training sets to develop robust models. However, large training sets based on the target trait deoxynivalenol (DON) are usually not available. Due to the rather moderate correlation between FHB and DON, we recommend a negative selection based on genomic estimated breeding values (GEBVs) for FHB severity in early breeding stages. In the long-run, however, we encourage breeders to build and test GS calibrations for DON content in triticale. The genetic architecture of GER caused by Fusarium graminearum in maize was investigated in Brazilian tropical germplasm in multi-environment trials. We observed high genotype-by-environment interactions which requires trials in many environments for the identification of stable QTL. We identified four QTL that explained between 5 to 22% of the genotypic variance. Most of the resistance alleles identified in our study originated from the Brazilian tropical parents indicating the potential of this exotic germplasm as resistance source. The QTL located on chromosome bin 1.02 was identified both in Brazilian and in European trials, and across all six biparental populations. This QTL is likely stable, an important feature for its successful employment across different genetic backgrounds and environments. This stable QTL is a great candidate for validation and fine mapping, and subsequent introgression in European germplasm but possible negative linkage drag should be tackled. NCLB is another economically important disease in maize and the most devastating leaf disease in maize grown in Europe. Virulent races have already overcome the majority of known qualitative resistances. Therefore, a constant monitoring of S. turcica races is necessary to assist breeders on the choice of effective resistances in each target environment. We investigated the genetic architecture of NCLB in Brazilian tropical germplasm and identified 17 QTL distributed along the ten chromosomes of maize explaining 4 to 31% of the trait genotypic variance each. Most of the alleles reducing the infections originated from Brazilian germplasm and reduced NCLB between 0.3 to 2.5 scores in the 1-9 severity scale, showing the potential of Brazilian germplasm to reduce not only GER but also NCLB severity in maize. These QTL were identified across a wide range of environments comprising different S. turcica race compositions indicating race non-specific resistance and most likely stability. Indeed, QTL 7.03 and 9.03/9.04 were identified both in Brazil and in Europe being promising candidates for trait introgression. These major and stable QTL identified for GER and NCLB can be introgressed into elite germplasm by marker-assisted selection. Subsequently, an integration step is necessary to account for possible negative linkage drag. A rapid genomics-assisted breeding approach for the introgression and integration of exotic into adapted germplasm has been proposed in this thesis. Jointly, our results demonstrate the high potential of genomics-assisted breeding strategies to efficiently increase the quantitative resistance levels of NCLB in maize and Fusarium diseases in maize and in triticale. We identified favorable QTL to increase resistance levels in both crops. In addition, we successfully characterized Brazilian germplasm for GER and NCLB resistances. After validation and fine mapping, the introgression and integration of the QTL identified in this study might contribute to the release of resistant cultivars, an important pillar to cope with global food security.
The importance of Fusarium head blight resistance in the cereal breeding industry: Case studies from Germany and Austria
(2023) Miedaner, Thomas; Flamm, Clemens; Oberforster, Michael
Fusarium head blight (FHB) resistance in wheat and triticale has a high priority in the European Union because of the strict guidelines for the major mycotoxins deoxynivalenol (DON) and zearalenone (ZON) and the admission policy of the regulatory authorities. Potentially 70% of the arable land in Germany and about 60% in Austria can be affected by Fusarium. Although epidemics occur only in some years and/or some regions, DON and ZON are detected every year in varying amounts in wheat, rye and maize. Despite a high significance of FHB resistance in breeding companies, as validated by a recent survey, breeding progress in wheat is basically absent for FHB resistance in both countries. The main reasons are the complex inheritance of FHB resistance and the high proportions of the dwarfing allele Rht‐D1b in high‐yielding varieties promoting susceptibility. Despite this, some varieties with high FHB resistance (score 2–3 on the 1–9 scale) have been released that account, however, only for 11% and 18% of the multiplication area in Germany and Austria, respectively. For triticale, an official testing system for FHB resistance in terms of DON content exists in Germany and Austria, but not for the other cereals. Susceptibility to maize ear rot has been described in Austria, but not in Germany. Additionally, a testing system for stalk rot resistance in both countries should be established.
Molecular and agronomic assessment of genetic diversity and hybrid breeding in triticale
(2006) Tams, Swenja H.; Melchinger, Albrecht E.
Knowledge of the genetic diversity of a species is of paramount importance for the choice of crossing parents in line and hybrid breeding. Genetic distance (GD) estimates based on molecular markers proved to be well suited for direct exploration of the relationship within a germplasm pool. Triticale hybrid breeding and heterosis have received increasing attention in recent years. Hybrid seed production is highly attractive for autogamous species because of the built-in variety protection of hybrids in comparison to line varieties. The main objective was to appraise the prospect of hybrid breeding in European winter triticale and develop time- and cost-reducing strategies. In particular, the main objectives were to (i) assess and compare genetic diversity estimates in European winter triticale elite germplasm based on molecular markers and pedigree data, (ii) determine hybrid performance and heterosis in multiple environments, and (iii) evaluate prediction methods for hybrid performance and heterosis to support future hybrid breeding programs. Average coancestry coefficient between all pairs of the 128 European elite genotypes was low (f = 0.059) due to scanty information available for the majority of the varieties and breeding lines. Better estimates of genetic distance of triticale genotypes were obtained by molecular marker assessment with 93 simple sequence repeat (SSR) markers and 10 PstI/TaqI primer combinations of amplified fragment length polymorphism (AFLP) markers. While SSR markers have been developed in wheat and rye and are mapped in the genome, the location and distribution of AFLP markers is unknown. Both marker systems resulted in reliable genetic diversity estimates. The moderate correlation between genetic distance estimate (GD) of SSR and AFLP marker analyses (GDSSR; GDAFLP) corresponded with other studies. Cluster analysis and principle coordinate analysis revealed no clear separation of germplasm groups. Supported by a bootstrap analysis, it was concluded that both marker systems provide consistent information for germplasm identification. The lack of grouping is in concordance with the breeding history of triticale as a self-pollinator, the wide adaptation of the inter-generic species and the single end-use purpose. Simultaneously to the marker assessment, 209 F1 hybrids were produced by a chemical hybridizing agent. The hybrids and their parents (57 females and five testers) were evaluated in field trials in six environments in Germany during the season 2001-2002. A combined analysis revealed significant heterosis for all eight traits. The level of mid-parent heterosis was positive for grain yield, 1000-kernel weight, number of kernels per spike, test weight and plant height and negative for number of spikes per m², falling number and protein concentration. Forty-six of the hybrids outyielded modern varieties, which were included as checks, by 10% and more. This aspect is important for the success of hybrids on the market for commercial production. Results regarding hybrid performance, heterosis, GCA/SCA relationship, trait correlation in hybrids and parents and aspects regarding cost-effective high quality F1 seed production appear to be sufficiently positive to encourage further work on hybrid breeding. Approaches to reduce time and costs for the identification of superior parental combinations and the prediction of hybrid performance revealed no reliable method yet. Correlations between SCA and GD of parents based on the different marker systems were low for all traits, which hampers prediction. Grouping of germplasm based on GD estimates or on heterotic response of the hybrids could not be discovered in triticale. As a consequence, a first step for an optimum allocation of resources in commercial hybrid breeding programs is the development of heterotic groups. In the present study, several females have been sub-grouped according to their heterotic response and SCA for grain yield with two tester pairs. Following the early history of hybrid breeding in maize, a multi-stage procedure was suggested for triticale to evaluate and expand the sub-grouping and enhance heterosis among groups.
Molecular mapping of resistance and aggressiveness in the cereal/Fusarium head blight pathosystem
(2016) Kalih, Rasha; Miedaner, Thomas
Fusarium head blight (FHB) is one of the most destructive fungal diseases in small-grain cereals worldwide causing significant yield losses and contamination of grain with mycotoxins e.g., deoxynivalenol (DON). This renders the grain unsuitable for human consumption and animal feeding. Exploring the genetic mechanism of FHB resistance is considered the key tool for modern cereal breeding activities. Triticale, the intergeneric hybrid between wheat and rye, is an important cereal crop in Poland and Germany. Resistance breeding using genetic mapping to identify quantitative-trait loci (QTL) associated with FHB resistance represents the best strategy for controlling the disease. In parallel, understanding the mechanism of aggressiveness and DON production of F. graminearum will be a significant contribution to improve FHB management. The objectives of the present work were (1) identification of QTL related to FHB resistance in triticale, together with the analysis of the correlation of FHB severity with other related traits such as plant height and heading stage, (2) correlation between DON production and FHB severity, (3) mapping of dwarfing gene Ddw1 in triticale and studying its effect on FHB resistance, plant height and heading stage, (4) detection of SNPs in candidate genes associated with aggressiveness and DON production of a large Fusarium graminearum population in bread wheat. To study the genetic architecture of FHB resistance in triticale, five doubled-haploid (DH) triticale populations with 120 to 200 progenies were successfully tested under field conditions by inoculation with Fusarium culmorum (FC46) in multiple environments. All genotypes were evaluated for FHB resistance, plant height and heading stage. DArT markers were used to genotype triticale populations. Significant genotypic variances (P<0.001) were observed for FHB severity in all populations combined with high heritability. Twenty-two QTLs for FHB resistance in triticale were reported with two to five QTL per population, thus confirming the quantitative inheritance of FHB resistance in triticale. The most prominent (R2 ≥ 35%) QTLs were located on chromosomes 6A, 3B, 4R, and 5R. QTLs for plant height and heading stage were also detected in our work, some of them were overlapping with QTLs for FHB resistance. Correlation between FHB severity, DON content and Fusarium damaged kernels (FDK) in triticale was studied in the population Lasko x Alamo. Significant genotypic variance was detected for all traits. However, low correlation between FHB severity and DON content (r=0.31) was found. Interestingly, correlation between FHB severity and FDK rating was considerably higher (r=0.57). For FHB severity, two QTLs were detected in this population. A QTL located on chromosome 2A with minor effect for FHB severity was also a common QTL for DON content and FDK rating and explained ≥34% of genotypic variance for these two traits. A second QTL on chromosome 5R was a major QTL but it has no effect on DON content or FDK rating. For analyzing the rye dwarfing gene Ddw1 derived from the father Pigmej, 199 (DH) progenies were genotyped with DArT markers and in addition with conserved ortholog set (COS) markers linked to the Ddw1 locus in rye. QTL analyses detected three, four, and six QTLs for FHB severity, plant height and heading stage, respectively. Two specific markers tightly linked with Ddw1 on rye chromosome 5R explained 48, 77, and 71 % of genotypic variation for FHB severity, plant height, and heading stage, respectively. This is strong evidence, that we indeed detected the rye gene Ddw1 in this triticale population. Another objective was to highlight the association between quantitative variation of aggressiveness and DON production of 152 F. graminearum isolates with single nucleotide polymorphism (SNP) markers in seven candidate genes. One to three significant SNPs (P < 0.01 using cross-validation) were associated to FHB severity in four genes (i.e., Gmpk1, Mgv1, TRI6, and Erf2). For DON content, just one significant SNP was detected in the gene Mgv1 explaining 6.5% of the total genotypic variance. In conclusion, wide genetic variation in FHB resistance in triticale has been observed in five populations. QTL mapping analyses revealed twenty-two QTLs for FHB resistance derived from wheat and rye genomes. QTLs located on the rye genome were reported here for the first time and they are a new source for FHB resistance in triticale. In parallel, analysis of the diversity of four pathogenicity genes in F. graminearum is an important first step in inferring the genetic network of pathogenicity in this fungal pathogen.
Phänotypische und molekulare Analyse von Kreuzungsnachkommen auf Resistenz gegen Ährenfusariosen bei Triticale (x Triticosecale Wittmack)
(2011) Großmann, Maren; Großmann, Maren
Fusarium head blight (FHB) is an epidemic disease of cereals but disease control still is insufficiently possible. Resistance breeding can be addressed as one approach to reduce the mycotoxin contents. Since 2006 the European Union had strict rules governing the values for Desoxinivalenol (DON) in food products. The extraordinary loads through mycotoxins in triticale, which are caused by FHB, lead to large reductions in grain yield and quality. Beyond the fact that it can cause health issues in animals, especially in pig feed, it may induce financial burdens for farming industries. Resistance against FHB is inherited quantitatively with mainly additive effects and therefore is only recorded by complex field experiments. Molecular markers accelerate resistance breeding and enable specific introgressions of favorable QTL. The main topic of this thesis is to show the application possibilities of molecular markers for the investigation of FHB resistance in triticale. In detail this study aims to analyze factors leading to a minimized mycotoxin accumulation in perennial field trials at several locations. Furthermore genetic maps of two different crossing populations were compiled and QTL mapping for ear appearance, plant height, DON content and FHB resistance was implemented. For all populations significant varieties had been displayed for all characteristics. The average values for FHB rate were between 8 and 43 % depending on year and location. The heritability?s showed high values for each population (h2 = 0.7 ? 0.82). The substantial genotype-environment-interaction pointed out the importance of field experiments. Furthermore no significant correlation was obtained between ear appearance and plant height. Due to the fact that the correlation factor between DON-content and FHB rate was very low (r = 0.32) to moderate (r = 0,65). Therefore no assumption about the DON-content subjected to the FHB rate could be made. The mapping of both populations LASKO x ALAMO and LASKO x TRIMESTER has been accomplished with SSR- and DArT-markers. The rate of polymorphism could be increased from 7 - 12 % respectively to 9 - 18 %. Genetic maps were constructed with length of 1.815 and 1.407 cM. They indicated 5.19 and 4.54 cM in their average marker distances. Throughout the QTL mapping several QTL were detected (6 QTL for ear appearance, 4 QTL for plant height, 1 QTL for DON-content and 4 QTL for FHB rate). These QTL explained 8 to 66 % of the phenotypical variance. In addition crossing populations of LASKO x TRIMESTER showed 2 QTL for ear appearance, 1 for plant height and 2 QTL for FHB resistance, which could explain 3 to 41 % of the phenotypical variance. This was also observed in several other QTL-surveys for wheat. Prospectively using molecular markers and genetically engineered methods will increase the research and development of resistant varieties and lead to a reduced mycotoxin accumulation. So far neither genetic maps nor any QTL studies for FHB resistance or DON-content in triticale have been published. Due to the fact that resistance is transmitted by several genes numerous artificial inoculations have to be carried out during breeding. Additive gene effects are useful to combine several resistance genes from different parents. Established methods in plant breeding such as recurrent selection, phenotypical and marker-based selection are successfully in use to reduce FHB- symptoms and to reduce the mycotoxin value but these methods have to be improved. The results of this thesis are promising for a superior resistance breeding in the future.
Phenotypic, genetic, and genomic assessment of triticale lines and hybrids
(2017) Losert, Dominik; Würschum, Tobias
Triticale (×Triticosecale Wittmack) is a small grain cereal used for livestock feeding and as renewable energy source. These diverse types of usage lead to different breeding strategies, ideally resulting in continued increase of both, grain and biomass yield. Briefly, the objectives of this thesis were to explore aspects with relevance for line and hybrid breeding in triticale by phenotypic, genetic and genomic assessment of important traits. More specifically, the objectives of this study were to (i) evaluate agronomic traits, assess trait correlations, and investigate the amount of heterosis in triticale hybrids, (ii) examine the potential of line and hybrid cultivars for production of biomass, (iii) assess the phenotypic and genotypic variability in triticale germplasm, (iv) investigate long-term phenotypic trends based on cultivars registered in the past three decades, and (v) identify QTL for agronomical relevant traits. In conclusion, hybrids of triticale possess an increased biomass yield potential compared with their mid-parent values as well as compared with commercial reference cultivars. The findings on triticale germplasm and its breeding history provide important information for breeding programs. Furthermore, based on the obtained results, genomic approaches like marker-assisted or genomic selection appear promising to assist triticale breeding in the future.
Quantitativ-genetische Untersuchungen zur Vererbung der Resistenz gegen Ährenfusarium bei Triticale (x Triticosecale Wittmack)
(2004) Heinrich, Nicole; Miedaner, Thomas
Fusarium head blight (FHB), caused by Fusarium culmorum (W.G. Smith) Sacc. and F. graminearum Schwabe, is recognized as one of the most destructive diseases of small-grain cereals. Fusarium infection can cause substantial yield losses. Infected grain may also be contaminated by mycotoxins that are harmful to humans and livestock. Agronomical measures and fungicides are only partly effective in controlling FHB. The development of disease-resistant cultivars together with appropriate crop management practices are effective strategies to control FHB. In this study, seven triticale cultivars and three breeding strains, representing a range of FHB resistances, their 45 diallel F1 crosses, progenies of 15 F2s from a six-parent diallel and their 30 backcrosses (BC, 15 to each parent), and five F2:3 bulks were investigated. Parents and their progenies were grown in several environments (years, locations) and tested for FHB resistance after artificial inoculation with Fusarium culmorum. Within the scope of this study, three experiments were conducted to estimate various quantitative-genetic parameters of several traits. In Experiment 1, the influence of FHB on yield-related traits of the ten parents was assessed. Compared to a non-inoculated variant, Fusarium reduced 1000-grain weight by 10.0%, spike weight by 9.3%, the number of kernels per spike by 4.3%, and test weight by 7.4%. Inoculation also increased deoxynivalenol (DON, 26.4 mg kg-1) and exoantigen (1.34 OD). content of the kernels. Genotypic variation and genotype-environment interaction were significant for all traits. The correlation between symptom ratings (spikes, kernels) and yield traits and between spike weight and kernels per spike were negative and high. The aim of Experiment 2 was to estimate combining ability, hybrid performance and heterosis for FHB ratings, DON and exoantigen content. Heterosis of FHB for spike and kernel rating was small. Across environments, the DON content in F1 crosses, however, was 15.5% higher than their mid-parent value. A high and significant (P = 0.01) correlation of r = 0.8 was found for both spike and kernel FHB symptom ratings between mid-parent and F1 performance. Except for exoantigen content, the general combining ability (GCA) was the main source of variation, suggesting additive gene effects for FHB resistance. Significant specific combining ability variance implies non-additive types of allelic interaction also. Therefore, in some crosses dominant effects can play an important role. The relationship between the GCA effect of a parent and its per se performance was close. In Experiment 3, genetic variation and effects for FHB resistance were estimated in segregating generations. The resistance level of the parents and their F2 progenies were similar. In contrast, the resistance of the BC progenies to the resistant parent was considerably higher than that of the backcrosses to the susceptible parent. Significant differences between the means of the 15 crosses and a high genetic variation within crosses were observed. Transgression could not be detected. F2:3 bulks and their parents had a comparable resistance level. For F2 and BC progenies, the additive effect was more important than the dominant effect. In contrast, the F1 crosses had a higher dominant effect, but with a large error. The study revealed considerable genetic variation in all generations for FHB resistance that can be exploited in a breeding programme. The mainly additive genetic effect makes it possible to select crossing parents on the basis of their per se performance. Due to the importance of genotype-environment interaction, resistance tests in various environments are strongly recommended. Screening for FHB resistance can best be accomplished by assessing symptom ratings of spikes and/or the spike weight relative to a non-inoculated variant. The high cross-environment interaction variance in the F2 generation points to the problem of selecting in unreplicated segregating material. Selection should be postponed to the F3 or later generations. The large genetic variation of FHB resistance and the preponderance of additive gene effects are encouraging to further increase resistance in triticale by recurrent selection.
Ruminal degradation characteristics of barley, rye, and triticale grains assayed in situ and in vitro, and by near-infrared spectroscopy
(2017) Krieg, Jochen; Rodehutscord, Markus
The milk yield of dairy cows and related energy and protein requirements have steadily increased in the last few decades. Since feed intake has not increased to the same extent as nutritional requirements, the concentration of nutrients in mixed rations had to be increased. An increase in energy concentration is often achieved by the inclusion of high levels of cereal grains. In the EU—apart from wheat—barley, rye, and triticale are widely cultivated cereal grains. Starch (ST), followed by crude protein (CP), is the main constituent of cereal grains. The rate and extent of ruminal CP and ST degradation can influence the performance and health of dairy cows, but data that can enable the comparison of ruminal degradation within and between barley, rye, and triticale grains are scarce. Commonly used techniques to explore ruminal degradation of feed are in situ and in vitro incubations. Both techniques require ruminal-fistulated animals, but alternative methods are being demanded by the community, in order to reduce the number of animal trials. An approach with the potential to estimate the nutritional value of various feeds is near-infrared spectroscopy (NIRS). The present thesis has two major parts. In the first part, ruminal degradation parameters and the effective degradability (ED) of DM, CP, and ST from barley, rye, and triticale grains are investigated using standardised in situ and in vitro incubation techniques. A total of 20 genotypes per grain species were used. In the second part, NIRS calibrations were developed with the aim of estimating the CP and ST concentrations of cereal grains and their incubation residues. Subsequently, data from in situ experiments were used to establish the calibrations for estimating the ruminal in situ degradation of cereal grains from their spectral data. In situ degradation studies have been conducted by ruminal incubation, utilising three lactating cows. Ruminal degradation parameters and ED (ruminal passage rate = 8%//h) were calculated. For in vitro incubations, the samples were incubated in a rumen fluid-buffer mixture (‘Hohenheim Gas Test’). The gas production was recorded for estimating gas production kinetics. In vitro gas production—in combination with crude nutrient concentrations—was used to estimate the metabolisable energy concentration (ME) and digestibility of organic matter (dOM). The degradation rates differed between and within the grain species for DM, CP, and ST. The variation within grain species was not reflected in the ED of CP and ST, due to the relatively fast and almost complete degradation of the grains. The ED of CP was 77% (69–80%) for barley, 85% (83–86%) for rye, and 82% (79–84%) for triticale. The corresponding ED of ST was 86% (82–88%), 95% (92–96%), and 94% (90–95%). Accordingly, the estimated ME (barley: 13.5 MJ/kg DM, rye: 13.9 MJ/kg DM, triticale: 13.5 MJ/ kg DM) showed only relatively minor variation within one grain species. The dOM was overall at a high level (barley: 91.3%, rye: 95.3%, triticale: 95.8%). The relatively small variation within one grain species could not be explained by the chemical and physical characteristics of the samples. Hence, it was concluded that it is feasible to use mean values for every species in feed formulation and ration planning. In the second part of this thesis, it was shown that it is possible to replace chemical CP and ST analyses of samples from in situ studies by NIRS without affecting the calculated ruminal degradation characteristics. NIRS could be used to estimate the ED of CP and ST from cereal grains. The sample set to establish the calibrations included barley, durum, maize, rye, triticale, and wheat grains. Calibrations for the CP and ST concentration were extended to pea samples. The calibrations with the best validation performance for CP and ST concentration were obtained by using the wavelength segment of 1250 to 2450 nm and the first derivative of the spectra (CP: R2 = 0.99; SEP = 0.46% DM. ST: R2 = 0.99; SEP = 2.10% DM). The results of in situ studies did not differ, irrespective of whether chemical or NIRS analysis was used. Like the CP and ST concentration, the ED was estimated with a high accuracy (ED8 CP: R2 = 0.95; SEP = 2.43%. ED8 ST: R2 = 0.97; SEP = 2.45%). However, calibrations need to be extended before they can be recommended for routine use. The present thesis demonstrates that the ED of CP and ST of barley, rye, and triticale grains differ between the species, but variation within one grain species is relatively small and not related to the chemical and physical characteristics of the grain. Hence, under the prevailing cultivation conditions, the mean values for each grain species in feed evaluation are deemed adequate. It was demonstrated that NIRS has the potential to facilitate the evaluation of the nutritive value of cereal grains for ruminants.
Theoretical and experimental investigations on the exploitation of heterosis in hybrid breeding
(2009) Fischer, Sandra; Melchinger, Albrecht E.
Hybrid breeding has played a key role in the improvement of the productivity of many crops. Genetic variability, an essential prerequisite in plant breeding, is expected to decrease in heterotic groups as a result of continuous breeding efforts. The consequences of the narrowing of genetic variability are a decrease in selection gain and an increase in the susceptibility of cultivars. Thus, establishment of heterotic groups and broadening the genetic base of established heterotic groups are very important research topics in hybrid breeding. Our objectives were to (1) evaluate heterosis in winter triticale and identify heterotic groups based on field and SSR marker data, (2) investigate by field evaluations and SSR markers the heterotic relationships between the Central European heterotic groups in maize and rye and exotic germplasm from the US and Eastern Europe, respectively, and (3) monitor temporal changes over 30 years in the magnitude of variances due to general combining ability (GCA) and specific combining ability (SCA) in an applied hybrid maize breeding program. Triticale has low heterosis and, therefore, no hybrid cultivars have been developed, although an effective CMS system is available. Twenty-one lines and their 210 diallel crosses were field-evaluated for grain yield at five locations in Germany. 95 SSR markers were used to analyze the parents for identifying two diverse subgroups. Hybrid performance, midparent heterosis, and estimates of variance due to GCA and SCA were determined in a diallel, a 10 × 11 factorial, and the remaining two sub-diallels with 10 and 11 parents. In addition, we applied an enumeration algorithm, which explored the entire sample space to identify diverse heterotic groups and optimize different criteria in this context. The ratio of variance due to GCA to variance due to SCA was higher for factorials between groups of parents than in diallels and subdiallels within groups. The analyses indicated a more favorable ratio in situations with genetically distinct populations compared to situations with genetically less distinct populations. Application of the enumeration algorithm improved all criteria. F1 performance followed by heterosis were the most important criteria for development and enrichment of heterotic groups. Introgression of new germplasm to broaden the genetic base of heterotic groups is required to ensure continued genetic gains in hybrid breeding. In maize, we evaluated 19 inbreds belonging to two Central European heterotic groups and US heterotic groups and their factorial crosses in F1 and F2 generations for grain yield and dry matter concentration. The parental inbreds were additionally fingerprinted with 266 SSR markers. Multi-environment evaluation was performed in three mega-environments: Central Europe, US Cornbelt, and Southeast Europe. We found higher genetic diversity in the exotic germplasm than in the Central European heterotic groups. Based on F1 performance and heterosis, we conclude that non-Stiff Stalk germplasm should be introgressed into the Flint group and the Stiff Stalk germplasm into the Dent group. In rye, we evaluated testcrosses of 610 S0 clones belonging to the two Central European heterotic groups and five East European open-pollinated varieties (OPVs). S0 clones were fingerprinted with 30 SSR markers. We found higher genetic diversity in the OPVs compared to the Central European heterotic groups. The Carsten group had a narrow genetic base and should, therefore, be the primary target for genetic broadening. Nevertheless, all five OPVs were genetically closer to Petkus than Carsten. Two OPVs were identified as good candidates for introgression into Petkus and one into Carsten. We suggest to use selected clones of these populations for introgression. Continuous selection is expected to narrow the genetic base of heterotic groups over time. We studied the nature and magnitude of genetic variability in the breeding materials of the maize program of the University of Hohenheim, which is based on two heterotic groups with continuous enrichment by other germplasm. The data generated in multilocation field trials based on inter-group factorial designs conducted from 1975 to 2004 for grain yield and dry matter concentration were analyzed. There was neither a decrease in the magnitude of genetic variance nor a change in the predominance of variance due to GCA over variance due to SCA. Consequently, for avoiding the adverse effects of selection on genetic variation and for ensuring medium and long-term selection gains, heterotic groups should not be treated as closed populations, but should be continuously enriched by introgression of new germplasm.
Untersuchungen zur Aufbereitung und Umwandlung von Energiepflanzen in Biogas und Bioethanol
(2008) Schumacher, Britt; Jungbluth, Thomas
Due to finite fossil resources, one opportunity for the future is to increase the supply of energy out of renewable energy sources. One of many opportunities is the use of biomass, which offers plenty combinations of different kinds of biomass, paths of utilization and conversion techniques for a flexible adaptation to natural local and regional frameworks as well as the anthropogenic needs. For an efficient utilization of the limited arable land for the supply of bioenergy, there is a need of up-to-date and proof data about specific energy yields and yields per hectare. The aim of this investigation was to determine these data for the biogas and bioethanol sectors. Batch-tests were carried out in laboratory scaled digesters to investigate specific biogas and bioethanol yields. Additionally the testing of different techniques of pre-treatment for energy crops and their effects on the biogas yield and the progression of the formation of methane were focused. The conversion of maize silage and full ripe triticale into biogas and bioethanol was compared by an energy and environmental balance. The steam explosion technique was included. Pre-treatment The steam explosion pre-treatment of biomass increases the speed of formation of methane and partly increases the methane yields. The effects differ depending on the kind of biomass and the stage of ripening. Other techniques of pre-treatment like microwaving and cooking did not show significant or partly negative effects. A variation of parameters in the trial setup might be interesting. Besides the positive effects of the steam explosion technique there are some arguments like the additional costs of investment, the diminished concentration of nutrients respectively the increase of material flow against it. The additional energy consumption, mostly thermal energy, can be supplied from waste heat out of the combined heat and power plant (CHP). The screening and the production of technical enzymes for the efficient pre-degradation of raw materials containing high amounts of lignocellulose should be the subject of research and development in the future. The combination of biological (enzymatic), chemical, thermal and mechanical pre-treatment techniques need to be investigated with the focus on energy efficiency. Methane yields of energy crops and stillage A broad number of biogas tests had been carried out on various maize cultivars. The specific methane yields of the maize cultivars varied over the harvesting date differently. The cultivars with a low ripening number reached higher specific methane yields. The dominant factor for the energy yield per hectare was the dry matter yield, not the specific methane yield. In general it is recommended to use well adapted cultivars with high dry matter yields and a good ensilaging behaviour. The catch crops increased the methane yields per hectare just partly. But for reasons of soil conservation the cultivation is recommended. The nitrogen fertilizer had mostly a positive effect on the dry matter yields and the energy yields per hectare, respectively. Maize gained higher energy yields per hectare than switch grass. The utilization of stillage out of whole maize plants or triticale´s grain from the ethanol production as well as the utilization of by-products like straw in the biogas production could double the energy output per hectare compared to the simple ethanol production. Further options for the optimization of the biogas production under conditions of practice are digester systems well-adapted on the substrate, the use of multi step systems and the development of analytic methods in order to gain effective process control. Correlation between chemical components and measured methane yields The specific methane yields calculated out of the neutral detergents fibre, starch, sugar, raw proteins and its substrate-specific factors were very close to the experimentally determined yields of the maize cultivars for the four harvesting times. But the measured and calculated values showed no correlation. Whether the biogas tests can be replaced, by other methods or techniques of analysis of the components and the determination of additional components for the estimation of the potential of new cultivars, should be subject of further investigations. Bioethanol yields The energy yields on the conversion pathway bioethanol without using the by-products are lower than the yields via conversion into biogas, because the ethanol fermentation is limited on material that can be converted into sugar first. The advantage of the ethanol production is a fluid fuel as result of the process. Combining the ethanol production with a biogas plant, the by-products also can be used energetically and a gaseous energy carrier can be produced. There are high potentials for the bioprocess engineering, for instance in breeding of microorganisms for the degradation of lignocellulosic biomass or of C5-sugar. Furthermore a process optimization of water and energy input is recommended. Energy and environmental balance Biogas as well as bioethanol (combined with biogas) is able to reduce the consumption of non-renewable energy carrier and its emission under the investigated scenarios and the scoop set. A future task will be the development of differentiated and well-adapted concepts on the basis of a decision between (liquid) fuels or stationary supply of thermal and electrical energy out of biomass. The aim is an efficient use of the limited areas of arable land and forests for the supply with bioenergy carriers by a useful combination of biomass, paths of utilization and conversion technique depending on natural local and regional conditions as well as the anthropogenic needs.
Verbesserung der Energie-, Stoff- und Emissionsbilanzen bei der Bioethanolproduktion aus nachwachsenden Rohstoffen
(2010) Fleischer, Sven; Senn, Thomas
In this thesis, a process was realized that uses starchy raw material (triticale) as well as lignocellulosic biomass (corn silage) in one ethanol production process. In contrast to other so called 2nd generation ethanol processes, which only use lignocellulosic material, the problem of the very low potential ethanol concentration (