Large-scale genotyping and phenotyping of a worldwide winter wheat genebank for its use in pre-breeding

dc.contributor.authorSchulthess, Albert W.
dc.contributor.authorKale, Sandip M.
dc.contributor.authorZhao, Yusheng
dc.contributor.authorGogna, Abhishek
dc.contributor.authorRembe, Maximilian
dc.contributor.authorPhilipp, Norman
dc.contributor.authorLiu, Fang
dc.contributor.authorBeukert, Ulrike
dc.contributor.authorSerfling, Albrecht
dc.contributor.authorHimmelbach, Axel
dc.contributor.authorOppermann, Markus
dc.contributor.authorWeise, Stephan
dc.contributor.authorBoeven, Philipp H. G.
dc.contributor.authorSchacht, Johannes
dc.contributor.authorLongin, C. Friedrich H.
dc.contributor.authorKollers, Sonja
dc.contributor.authorPfeiffer, Nina
dc.contributor.authorKorzun, Viktor
dc.contributor.authorFiebig, Anne
dc.contributor.authorSchüler, Danuta
dc.contributor.authorLange, Matthias
dc.contributor.authorScholz, Uwe
dc.contributor.authorStein, Nils
dc.contributor.authorMascher, Martin
dc.contributor.authorReif, Jochen C.
dc.date.accessioned2025-10-02T10:29:27Z
dc.date.available2025-10-02T10:29:27Z
dc.date.issued2022
dc.date.updated2024-12-02T06:33:57Z
dc.description.abstractPlant genetic resources (PGR) stored at genebanks are humanity’s crop diversity savings for the future. Information on PGR contrasted with modern cultivars is key to select PGR parents for pre-breeding. Genotyping-by-sequencing was performed for 7,745 winter wheat PGR samples from the German Federal ex situ genebank at IPK Gatersleben and for 325 modern cultivars. Whole-genome shotgun sequencing was carried out for 446 diverse PGR samples and 322 modern cultivars and lines. In 19 field trials, 7,683 PGR and 232 elite cultivars were characterized for resistance to yellow rust - one of the major threats to wheat worldwide. Yield breeding values of 707 PGR were estimated using hybrid crosses with 36 cultivars - an approach that reduces the lack of agronomic adaptation of PGR and provides better estimates of their contribution to yield breeding. Cross-validations support the interoperability between genomic and phenotypic data. The here presented data are a stepping stone to unlock the functional variation of PGR for European pre-breeding and are the basis for future breeding and research activities.en
dc.description.sponsorshipBundesministerium für Bildung und Forschung (Federal Ministry of Education and Research) https://doi.org/10.13039/501100002347
dc.description.sponsorshipBundesministerium für Ernährung und Landwirtschaft (Federal Ministry of Food and Agriculture) https://doi.org/10.13039/501100005908
dc.identifier.swb1831277921
dc.identifier.urihttps://doi.org/10.1038/s41597-022-01891-5
dc.identifier.urihttps://hohpublica.uni-hohenheim.de/handle/123456789/16980
dc.language.isoeng
dc.rights.licensecc_by
dc.subjectGenome sequence
dc.subjectGrain yield trait
dc.subjectGenotyping-by-sequencing
dc.subjectWhole genome shotgun sequencing
dc.subjectCombine harvester
dc.subjectTriticum aestivum
dc.subject.ddc630
dc.titleLarge-scale genotyping and phenotyping of a worldwide winter wheat genebank for its use in pre-breedingen
dc.type.diniArticle
dcterms.bibliographicCitationScientific data, 9 (2022), 784. https://doi.org/10.1038/s41597-022-01891-5. ISSN: 2052-4463
dcterms.bibliographicCitation.issn2052-4463
dcterms.bibliographicCitation.issue
dcterms.bibliographicCitation.journaltitleScientific data
dcterms.bibliographicCitation.originalpublishernameNature Publishing Group UK
dcterms.bibliographicCitation.volume9
local.export.bibtex@article{Schulthess2022, doi = {10.1038/s41597-022-01891-5}, doi = {https://hohpublica.uni-hohenheim.de/handle/123456789/16980}, author = {Schulthess, Albert W. and Kale, Sandip M. and Zhao, Yusheng et al.}, title = {Large-scale genotyping and phenotyping of a worldwide winter wheat genebank for its use in pre-breeding}, journal = {Scientific data}, year = {2022}, volume = {9}, }
local.subject.sdg2
local.subject.sdg12
local.subject.sdg15
local.title.fullLarge-scale genotyping and phenotyping of a worldwide winter wheat genebank for its use in pre-breeding

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