Institut für Phytomedizin

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Development and testing of a precision hoeing system for re-compacted ridge tillage in maize
(2024) Alagbo, Oyebanji O.; Saile, Marcus; Spaeth, Michael; Schumacher, Matthias; Gerhards, Roland
Ridge tillage (RT) is a conservation practice that provides several benefits such as enhanced root growth and reduced soil erosion. The objectives of this study were to develop an autosteered living mulch seeder and hoeing prototype for RT systems using RTK-GNSS (real-time kinematic global navigation satellite systems) created ridges as a guide. It was also aimed to compare weed control efficacy and crop response of ridge-hoeing compared to conventional hoeing in flat tillage (FT). It was further aimed to investigate the impact of a new RT technology (with ridge re-compaction) on maize root development, yield, soil temperature, and moisture compared to FT. Field experiments were conducted with maize in 2021 and 2022 in a two-factorial split-plot design with tillage (RT and FT) as main treatment and weed control (untreated, herbicide, twice hoeing, hoeing + living mulch) as sub-treatment factors. Weed density, coverage, biomass, crop density, weed control efficacy (WCE) and maize silage yield were assessed. Temperature loggers were installed within RT and FT to take temperature readings at 20 min. Soil moisture and root penetrability were measured every two weeks in each plot using soil samples and a penetrometer. The WCE and yield did not differ significantly between the tillage systems. Twice hoeing resulted in 71–80 % WCE, which was equal to herbicide treatment. Hoeing + living mulch achieved 70–72 % WCE. Different from previous studies with ridge tillage, temperatures in the compacted ridges did not consistently differ from the ridge valleys and flat seedbeds. Root penetration (against 1.4 MPa penetrometer cone index) was 40 % higher in RT than in FT. On average, RT maize produced more (53.6 g m−2) root biomass compared to FT. In summary, re-compacted ridges built along RTK-GNSS lines can allow post-emergent hoeing and living mulch seeding along ridges and also provide good growing conditions for maize.
A novel dataset of annotated oyster mushroom images with environmental context for machine learning applications
(2024) Duman, Sonay; Elewi, Abdullah; Hajhamed, Abdulsalam; Khankan, Rasheed; Souag, Amina; Ahmed, Asma
State-of-the-art technologies such as computer vision and machine learning, are revolutionizing the smart mushroom industry by addressing diverse challenges in yield prediction, growth analysis, mushroom classification, disease and deformation detection, and digital twinning. However, mushrooms have long presented a challenge to automated systems due to their varied sizes, shapes, and surface characteristics, limiting the effectiveness of technologies aimed at mushroom classification and growth analysis. Clean and well-labelled datasets are therefore a cornerstone for developing efficient machine-learning models. Bridging this gap in oyster mushroom cultivation, we present a novel dataset comprising 555 high-quality camera raw images, from which approximately 16.000 manually annotated images were extracted. These images capture mushrooms in various shapes, maturity stages, and conditions, photographed in a greenhouse using two cameras for comprehensive coverage. Alongside the images, we recorded key environmental parameters within the mushroom greenhouse, such as temperature, relative humidity, moisture, and air quality, for a holistic analysis. This dataset is unique in providing both visual and environmental time-point data, organized into four storage folders: “Raw Images”; “Mushroom Labelled Images and Annotation Files”; “Maturity Labelled Images and Annotation Files”; and “Sensor Data”, which includes time-stamped sensor readings in Excel files. This dataset can enable researchers to develop high-quality prediction and classification machine learning models for the intelligent cultivation of oyster mushrooms. Beyond mushroom cultivation, this dataset also has the potential to be utilized in the fields of computer vision, artificial intelligence, robotics, precision agriculture, and fungal studies in general.
Role of benzoic acid and lettucenin A in the defense response of lettuce against soil-borne pathogens
(2021) Windisch, Saskia; Walter, Anja; Moradtalab, Narges; Walker, Frank; Höglinger, Birgit; El-Hasan, Abbas; Ludewig, Uwe; Neumann, Günter; Grosch, Rita
Soil-borne pathogens can severely limit plant productivity. Induced defense responses are plant strategies to counteract pathogen-related damage and yield loss. In this study, we hypothesized that benzoic acid and lettucenin A are involved as defense compounds against Rhizoctonia solani and Olpidium virulentus in lettuce. To address this hypothesis, we conducted growth chamber experiments using hydroponics, peat culture substrate and soil culture in pots and minirhizotrons. Benzoic acid was identified as root exudate released from lettuce plants upon pathogen infection, with pre-accumulation of benzoic acid esters in the root tissue. The amounts were sufficient to inhibit hyphal growth of R. solani in vitro (30%), to mitigate growth retardation (51%) and damage of fine roots (130%) in lettuce plants caused by R. solani, but were not able to overcome plant growth suppression induced by Olpidium infection. Additionally, lettucenin A was identified as major phytoalexin, with local accumulation in affected plant tissues upon infection with pathogens or chemical elicitation (CuSO4) and detected in trace amounts in root exudates. The results suggest a two-stage defense mechanism with pathogen-induced benzoic acid exudation initially located in the rhizosphere followed by accumulation of lettucenin A locally restricted to affected root and leaf tissues.
Assessment of a postharvest treatment with pyrimethanil via thermo-nebulization in controlling storage rots of apples
(2021) Büchele, Felix; Neuwald, Daniel A.; Scheer, Christian; Wood, Rachael M.; Vögele, Ralf T.; Wünsche, Jens N.
Apples are very susceptible to infections from various fungal pathogens during the growing season due to prolonged exposure to environmental influences in the field. Therefore, a strict and targeted fungicide strategy is essential to protect fruit and trees. Increased environmental and health concerns and pathogen resistance have resulted in a rising demand to reduce fungicide usage and residues on marketed fruit. Thus, producers must develop new plant protection strategies to conform to the legal and social demands while still offering high-quality apples. This study assessed the efficacy of a post-harvest fungicide treatment with pyrimethanil via thermo-nebulization for controlling storage rots and compared the results to those of standard pre-harvest fungicide strategies. The results showed that a single post-harvest application of pyrimethanil successfully controlled storage rots and is comparable to strategies using multiple pre-harvest fungicide applications. The control of fungal rot was sustained even after 5 months of storage and 2 weeks of shelf life. Thermo-nebulization into the storage facility allowed for a lower dosage of fungicide to be used compared to pre-harvest applications, while still maintaining optimal rot control. Residue analyses showed that the post-harvest fungicide treatment did not exceed legal or retailer’s standards.
Exploring the effects of different stubble tillage practices and glyphosate application combined with the new soil residual herbicide cinmethylin against Alopecurus myosuroides Huds. in winter wheat
(2022) Messelhäuser, Miriam Hannah; Saile, Marcus; Sievernich, Bernd; Gerhards, Roland
Effective control of Alopecurus myosuroides Huds. (blackgrass) solely with a chemical treatment is not guaranteed anymore because populations exhibit resistance to almost all herbicide modes of action. Integrated weed management (IWM) against blackgrass is necessary to maintain high weed control efficacies in winter cereals. Four field experiments were conducted in Southwest Germany from 2018 to 2020 to control A. myosuroides with a combination of cultural and chemical methods. Stubble treatments, including flat, deep and inversion soil tillage; false seedbed preparation and glyphosate use, were combined with the application of the new pre-emergence herbicide cinmethylin in two rates in winter wheat. Average densities of A. myosuroides in the untreated control plots were up to 505 plants m−2. The combination of different stubble management strategies and the pre-emergence herbicide cinmethylin controlled 86–97% of A. myosuroides plants at the low rate and 95–100% at the high rate until 120 days after sowing. The different stubble tillage practices varied in their efficacy between trials and years. Most effective and consistent were pre-sowing glyphosate application on the stubble and stale seedbed preparation with a disc harrow. Stubble treatments increased winter wheat density in the first year but had no effect on crop density in the second year. Pre-emergence application of cinmethylin did not reduce winter wheat densities. Multiple tactics of weed control, including stubble treatments and pre-emergence application of cinmethylin, provided higher and more consistent control of A. myosuroides. Integration of cultural weed management could prevent the herbicide resistance development.
Agronomic and technical evaluation of herbicide spot spraying in maize based on high-resolution aerial weed maps - an on-farm trial
(2024) Allmendinger, Alicia; Spaeth, Michael; Saile, Marcus; Peteinatos, Gerassimos G.; Gerhards, Roland; Allmendinger, Alicia; Department of Weed Science, Institute for Phytomedicine, University of Hohenheim, 70599 Stuttgart, Germany; (A.A.);; Spaeth, Michael; Department of Weed Science, Institute for Phytomedicine, University of Hohenheim, 70599 Stuttgart, Germany; (A.A.);; Saile, Marcus; Department of Weed Science, Institute for Phytomedicine, University of Hohenheim, 70599 Stuttgart, Germany; (A.A.);; Peteinatos, Gerassimos G.; ELGO-DIMITRA, Leof Dimokratias 61, Agii Anargiri, 135 61 Athens, Greece;; Gerhards, Roland; Department of Weed Science, Institute for Phytomedicine, University of Hohenheim, 70599 Stuttgart, Germany; (A.A.);; Rossi, Vittorio
Spot spraying can significantly reduce herbicide use while maintaining equal weed control efficacy as a broadcast application of herbicides. Several online spot-spraying systems have been developed, with sensors mounted on the sprayer or by recording the RTK-GNSS position of each crop seed. In this study, spot spraying was realized offline based on georeferenced unmanned aerial vehicle (UAV) images with high spatial resolution. Studies were conducted in four maize fields in Southwestern Germany in 2023. A randomized complete block design was used with seven treatments containing broadcast and spot applications of pre-emergence and post-emergence herbicides. Post-emergence herbicides were applied at 2–4-leaf and at 6–8-leaf stages of maize. Weed and crop density, weed control efficacy (WCE), crop losses, accuracy of weed classification in UAV images, herbicide savings and maize yield were measured and analyzed. On average, 94% of all weed plants were correctly identified in the UAV images with the automatic classifier. Spot-spraying achieved up to 86% WCE, which was equal to the broadcast herbicide treatment. Early spot spraying saved 47% of herbicides compared to the broadcast herbicide application. Maize yields in the spot-spraying plots were equal to the broadcast herbicide application plots. This study demonstrates that spot-spraying based on UAV weed maps is feasible and provides a significant reduction in herbicide use.
CRISPR/SpCas9‐mediated double knockout of barley Microrchidia MORC1 and MORC6a reveals their strong involvement in plant immunity, transcriptional gene silencing and plant growth
(2021) Galli, Matteo; Martiny, Engie; Imani, Jafargholi; Kumar, Neelendra; Koch, Aline; Steinbrenner, Jens; Kogel, Karl‐Heinz
The Microrchidia (MORC) family proteins are important nuclear regulators in both animals and plants with critical roles in epigenetic gene silencing and genome stabilization. In the crop plant barley (Hordeum vulgare), seven MORC gene family members have been described. While barley HvMORC1 has been functionally characterized, very little information is available about other HvMORC paralogs. In this study, we elucidate the role of HvMORC6a and its potential interactors in regulating plant immunity via analysis of CRISPR/SpCas9‐mediated single and double knockout (dKO) mutants, hvmorc1 (previously generated and characterized by our group), hvmorc6a, and hvmorc1/6a. For generation of hvmorc1/6a, we utilized two different strategies: (i) successive Agrobacterium‐mediated transformation of homozygous single mutants, hvmorc1 and hvmorc6a, with the respective second construct, and (ii) simultaneous transformation with both hvmorc1 and hvmorc6a CRISPR/SpCas9 constructs. Total mutation efficiency in transformed homozygous single mutants ranged from 80 to 90%, while upon simultaneous transformation, SpCas9‐induced mutation in both HvMORC1 and HvMORC6a genes was observed in 58% of T0 plants. Subsequent infection assays showed that HvMORC6a covers a key role in resistance to biotrophic (Blumeria graminis) and necrotrophic (Fusarium graminearum) plant pathogenic fungi, where the dKO hvmorc1/6a showed the strongest resistant phenotype. Consistent with this, the dKO showed highest levels of basal PR gene expression and derepression of TEs. Finally, we demonstrate that HvMORC1 and HvMORC6a form distinct nucleocytoplasmic homo‐/heteromers with other HvMORCs and interact with components of the RNA‐directed DNA methylation (RdDM) pathway, further substantiating that MORC proteins are involved in the regulation of TEs in barley.
Successful silencing of the mycotoxin synthesis gene TRI5 in fusarium culmorum and observation of reduced virulence in VIGS and SIGS experiments
(2022) Tretiakova, Polina; Voegele, Ralf Thomas; Soloviev, Alexander; Link, Tobias Immanuel
Crops constantly experience various biotic stresses during their life cycle, and Fusarium spp. remain one of the most serious groups of pathogens affecting plants. The ability to manipulate the expression of certain microorganism genes via RNAi creates the opportunity for new-generation dsRNA-based preparations to control a large number of diseases. In this study, we applied virus-induced gene silencing (VIGS), and spray-induced gene silencing (SIGS) to silence the trichothecene-producing gene TRI5 in F. culmorum as a means to reduce its aggressiveness on spring wheat. Treatment of the fungus with dsTRI5RNA in vitro reduced deoxynivalenol (DON) and 3-acetyldeoxynivalenol (3-A-DON) accumulations by 53–85% and 61–87%, respectively, and reduced TRI5 expression by 84–97%. VIGS decreased the proportion of infected wheat spikelets by 73%, but upregulation was observed for TRI5. SIGS on wheat leaves and ears using certain dsTRI5RNA amounts negatively impacted F. culmorum growth. However, when performing in vivo analyses of TRI5 mRNA levels, the upregulation of the gene was determined in the variants where fungal colonization was restricted, suggesting a compensatory reaction of the pathogen to RNAi.
Advances in site-specific weed management in agriculture: A review
(2022) Gerhards, Roland; Andújar Sanchez, Dionisio; Hamouz, Pavel; Peteinatos, Gerassimos G.; Christensen, Svend; Fernandez‐Quintanilla, Cesar
The developments of information and automation technologies have opened a new era for weed management to fit physical and chemical control treatments to the spatial and temporal heterogeneity of weed distributions in agricultural fields. This review describes the technologies of site‐specific weed management (SSWM) systems, evaluates their ecological and economic benefits and gives a perspective for the implementation in practical farming. Sensor technologies including 3D cameras, multispectral imaging and Artificial Intelligence (AI) for weed classification and computer‐based decision algorithms are described in combination with precise spraying and hoeing operations. Those treatments are targeted for patches of weeds or individual weed plants. Cameras can also guide inter‐row hoes precisely in the centre between two crop rows at much higher driving speed. Camera‐guided hoeing increased selectivity and weed control efficacy compared with manual steered hoeing. Robots combine those guiding systems with in‐row hoeing or spot spraying systems that can selectively control individual weeds within crop rows. Results with patch spraying show at least 50% saving of herbicides in various crops without causing additional costs for weed control in the following years. A challenge with these technologies is the interoperability of sensing and controllers. Most of the current SSWM technologies use their own IT protocols that do not allow connecting different sensors and implements. Plug & play standards for linking detection, decision making and weeding would improve the adoption of new SSWM technologies and reduce operational costs. An important impact of SSWM is the potential contribution to the EU‐Green Deal targets to reduce pesticide use and increase biodiversity. However, further on‐farm research is needed for integrating those technologies into agricultural practice.
New approaches to manage Asian soybean rust (Phakopsora pachyrhizi) using Trichoderma spp. or their antifungal secondary metabolites
(2022) El-Hasan, Abbas; Walker, Frank; Klaiber, Iris; Schöne, Jochen; Pfannstiel, Jens; Voegele, Ralf T.
Attempts have been made to determine the in vitro and in planta suppressive potential of particular Trichoderma strains (T16 and T23) and their secondary metabolites (SMs) against Asian soybean rust (ASR) incited by Phakopsora pachyrhizi. Aside from the previously identified SMs 6-pentyl-α-pyrone (6PAP) and viridiofungin A (VFA), the chemical structures of harzianic acid (HA), iso-harzianic acid (iso-HA), and harzianolide (HZL) were characterized in this study. Our results indicate that exposure of urediospores to 200 ppm 6PAP completely inhibits germination. A slightly higher dosage (250 ppm) of HZL and VFA reduces germination by 53.7% and 44%, respectively. Germ tube elongation seems more sensitive to 6PAP than urediospore germination. On detached leaves, application of conidia of T16 and T23 results in 81.4% and 74.3% protection, respectively. Likewise, 200 ppm 6PAP recorded the highest ASR suppression (98%), followed by HZL (78%) and HA (69%). Treatment of undetached leaves with 6PAP, HA, or HZL reduces ASR severity by 84.2%, 65.8%, and 50.4%, respectively. Disease reduction on the next, untreated trifoliate by T23 (53%), T16 (41%), HZL (42%), and 6PAP (32%) suggests a translocation or systemic activity of the SMs and their producers. To our knowledge, this study provides the first proof for controlling ASR using antifungal SMs of Trichoderma. Our findings strongly recommend the integration of these innovative metabolites, particularly 6PAP and/or their producers in ASR management strategies.
Precision chemical weed management strategies: A review and a design of a new CNN-based modular spot sprayer
(2022) Allmendinger, Alicia; Spaeth, Michael; Saile, Marcus; Peteinatos, Gerassimos G.; Gerhards, Roland
Site-specific weed control offers a great potential for herbicide savings in agricultural crops without causing yield losses and additional weed management costs in the following years. Therefore, precision weed management is an efficient tool to meet the EU targets for pesticide reduction. This review summarizes different commercial technologies and prototypes for precision patch spraying and spot spraying. All the presented technologies have in common that they consist of three essential parts. (1) Sensors and classifiers for weed/crop detection, (2) Decision algorithms to decide whether weed control is needed and to determine a suitable type and rate of herbicide. Usually, decision algorithms are installed on a controller and (3) a precise sprayer with boom section control or single nozzle control. One point that differs between some of the techniques is the way the decision algorithms classify. They are based on different approaches. Green vegetation can be differentiated from soil and crop residues based on spectral information in the visible and near-infrared wavebands (“Green on Brown”). Those sensors can be applied for real-time on/off control of single nozzles to control weeds before sowing after conservation tillage and in the inter-row area of crops. More sophisticated imaging algorithms are used to classify weeds in crops (“Green on Green”). This paper will focus on Convolutional Neural Networks (CNN) for plant species identification. Alternatively, the position of each crop can be recorded during sowing/planting and afterward herbicides can be targeted to single weeds or larger patches of weeds if the economic weed threshold is exceeded. With a standardized protocol of data communication between sensor, controller and sprayer, the user can combine different sensors with different sprayers. In this review, an ISOBUS communication protocol is presented for a spot sprayer. Precision chemical weed control can be realized with tractor-mounted sprayers and autonomous robots. Commercial systems for both classes will be introduced and their economic and environmental benefits and limitations will be highlighted. Farmers ask for robust systems with less need for maintenance and flexible application in different crops.
Effects of a two-factorial dynamic storage system on apple fruit metabolism, quality attributes, disorder incidences and biochemical properties
(2024) Büchele, Felix; Vögele, Ralf; Kittemann, Dominikus
Dynamic Controlled Atmosphere (DCA) technologies are designed to monitor the metabolism of fruit as a function of time and the oxygen partial pressure (pO2) in the storage atmosphere. By identifying signals sent by the fruit in response to low oxygen stress, this concept allows defining the lowest oxygen level tolerated by the fruit material and the specific and transient pO2, which is proposed to slow down the aerobic respiration of the fruit to a minimum and accordingly the ripening-related loss of fruit quality. This work examines a novel storage technology for pome fruit referred to as DCA-CD+, which can be considered the first generation of a two-factorial dynamic storage system. DCA-CD+ aims to define both a transient optimum pO2 and storage temperature in real-time, based on monitoring the carbon dioxide (CO2) production rate of the stored product. The CO2-release rate is proposed as a dependable indicator of low oxygen stress and an accurate depiction of the metabolic intensity of the fruit in response to temperature variations. The idea behind dynamic temperature adjustments is based on the assumption, that increased storage temperatures can reduce the energy usage of the refrigeration systems during long-term storage substantially, while also mitigating oxidative stress in the fruit, thus contributing to reducing the occurrence of storage disorders. The extremely low pO2 levels established in the storage atmosphere are suggested to counteract the ripening-inducing effects of this dynamic temperature approach. The assessment of DCA-CD+ in this work is based on a comparison to other postharvest conditions such as cold storage (RA) or static controlled atmosphere (CA). Furthermore, the interactions between storage atmosphere, temperature, and applications of the ethylene-inhibitor product 1-methylcyclopropene (1-MCP) are investigated. The conducted biochemical analyses highlight that apples stored under DCA-CD+ undergo repeated periods of hypoxia. Fruit adapt to the energy crisis induced by low oxygen stress by increasing their glycolytic flux, which is coupled to the activation of the fermentative pathway. Importantly, none of the examined apple cultivars in any of the experimental seasons exceeded critical thresholds for volatile fermentative products acetaldehyde (AA) and ethanol (EtOH), which could potentially be associated with the development of off-flavors or internal disorder symptoms. Consequently, the atmospheric conditions implemented did not result in any fruit damage associated with low oxygen stress in any of the tested scenarios. These findings suggest that DCA-CD+, specifically the use of carbon dioxide as an input value, is effective in identifying low oxygen stress in stored fruit and defining the pO2 for optimum quality conservation. pO2 setpoint calculation by the DCA-CD+ algorithm showed an interaction effect with the respective storage temperatures. Furthermore, the sensitivity of the stored fruit to temperature variation was found to be cultivar-dependent and transient during the storage period. Depending on the stored apple cultivar and season, DCA-CD+ calculated temperature setpoints reaching up to 3°C to 4°C, from the baseline temperature of 1°C. Temperature peaks were generally followed by a significant decrease in the calculated temperature setpoints, as an increased CO2 production rate signaled an intensifying fruit metabolism due to elevated storage temperature. The analysis of quality-defining parameters and disorder symptoms support the conclusion that DCA-CD+ allows for dynamic temperature adjustments without accelerating fruit ripening and the associated loss of quality. Preliminary findings indicate that this approach can reduce the energy usage of the cooling system in commercial storage rooms, without requiring cost-intensive additional installation of technology or renovations of room structural components. Lower pO2 setpoints were calculated at higher temperatures, suggesting that increasing the storage temperature can contribute to alleviating low oxygen stress in apples. Improved conservation of fruit quality attributes and a reduction in storage disorder incidences of DCA-CD+ in comparison to CA could be demonstrated in some instances, contingent on experimental season and apple cultivar. These benefits presumably become more pronounced with extended storage durations exceeding eight months. Ultimately, it can be argued that the complementary and interactive effects of dynamic temperature and oxygen in DCA-CD+ with 1-MCP application provide the highest potential for fruit quality conservation, limiting storage disorder, and reducing cooling-related energy usage. DCA-CD+ was demonstrated to potentially counteract detrimental effects of 1-MCP applications, e.g. an increased risk of carbon dioxide injuries. This work aimed to contribute to understanding the mechanisms behind the interference of the established temperature and atmospheric conditions in the DCA-CD+ system with the volatile aroma profile of apples. It was demonstrated that the synthesis capacity of volatile organic compounds (VOC) is primarily suppressed on a principal substrate level, and less in the later conversion of aldehydes to alcohols and esters. The pathways for the synthesis of linear volatiles originating from fatty acids were determined more responsive to low oxygen environments, in comparison to the pathways of branched volatiles derived from amino acids. Further insights were gained into the physiological mechanisms underlying the activation of the fermentative pathway, suggesting it functions as an adaptation mechanism not exclusively linked to low oxygen stress. Moreover, efforts were made to establish a connection between ripening and disorder-related modifications in cell structural components and associated alterations in the volatile profile, primarily highlighting the role of the lipoxygenase pathway. Statistical classification demonstrated that the repeated induction of low oxygen stress in DCA-CD+ storage resulted in a distinct volatile profile and a higher association with aroma defining compounds compared to CA storage. The observed increased EtOH accumulation is discussed to mitigate the ripening-inducing effects of the hormone ethylene, while also providing additional substrate for the synthesis of ethyl esters. Preliminary findings of this work indicate that storage temperatures can play a role in the aroma development of stored apples, even when low pO2 conditions are established. In summary, this study created a comprehensive documentation of the commercial viability of two-factorial dynamic storage systems for pome fruit and provided insights into the metabolomic responses of apples to extremely low oxygen levels, particularly in interaction with dynamic storage temperature adjustments.
Metabolization and sequestration of plant specialized metabolites in insect herbivores: Current and emerging approaches
(2022) Jeckel, Adriana Moriguchi; Beran, Franziska; Züst, Tobias; Younkin, Gordon; Petschenka, Georg; Pokharel, Prayan; Dreisbach, Domenic; Ganal-Vonarburg, Stephanie Christine; Robert, Christelle Aurélie Maud
Herbivorous insects encounter diverse plant specialized metabolites (PSMs) in their diet, that have deterrent, anti-nutritional, or toxic properties. Understanding how they cope with PSMs is crucial to understand their biology, population dynamics, and evolution. This review summarizes current and emerging cutting-edge methods that can be used to characterize the metabolic fate of PSMs, from ingestion to excretion or sequestration. It further emphasizes a workflow that enables not only to study PSM metabolism at different scales, but also to tackle and validate the genetic and biochemical mechanisms involved in PSM resistance by herbivores. This review thus aims at facilitating research on PSM-mediated plant-herbivore interactions.
Facilitation of weed seed predation by living mulch and cover crops
(2022) Schumacher, Matthias; Gerhards, Roland
Weed seed predation (WSP) is an important agro‐ecosystem service that naturally suppresses weed populations. Disturbances directly interfere with the activity of the seed predators, for example, harvest and soil tillage during a peak in weed seed availability (around cereal harvest). Plant soil cover and reduced soil tillage are factors that might positively affect WSP. We investigated cover crops and living mulch along with soil disturbance (no‐till and conventional seeding) in comparison to a fallow and repeated stubble tillage with a chisel plough in terms of WSP, activity‐density of carabid beetles and soil cover. A field experiment with a randomised complete block design and four replications was conducted at two sites from 2017 until 2019. WSP rates were assessed with seed cards and exclosure cages from July until November during a period of eight consecutive days each month. Living mulch exhibited the highest WSP rates of 72% with a maximum of 95% immediately following cereal harvest in August and September of 2017 and 2019, while the remainder of the treatments ranged from 2% to 5% WSP. In October and November mustard showed on average twice as high WSP rates compared to the other treatments (50% vs. 10%–25%). Seeding and soil tillage did not significantly influence carabid beetle activity‐density and WSP, except for living mulch. Predator groups (invertebrates and vertebrates) were not influenced by the various treatments, rather year and month determined the predator groups dominance. Besides their weed suppressive effects, living mulches and cover crops also facilitate WSP.
Characterization of Bacillus velezensis UTB96, demonstrating improved lipopeptide production compared to the strain B. velezensis FZB42
(2022) Vahidinasab, Maliheh; Adiek, Isabel; Hosseini, Behnoush; Akintayo, Stephen Olusanmi; Abrishamchi, Bahar; Pfannstiel, Jens; Henkel, Marius; Lilge, Lars; Vögele, Ralf ; Hausmann, Rudolf
Bacillus strains can produce various lipopeptides, known for their antifungal properties. This makes them attractive metabolites for applications in agriculture. Therefore, identification of productive wild-type strains is essential for the development of biopesticides. Bacillus velezensis FZB42 is a well-established strain for biocontrol of plant pathogens in agriculture. Here, we characterized an alternative strain, B. velezensis UTB96, that can produce higher amounts of all three major lipopeptide families, namely surfactin, fengycin, and iturin. UTB96 produces iturin A. Furthermore, UTB96 showed superior antifungal activity towards the soybean fungal pathogen Diaporthe longicolla compared to FZB42. Moreover, the additional provision of different amino acids for lipopeptide production in UTB96 was investigated. Lysine and alanine had stimulatory effects on the production of all three lipopeptide families, while supplementation of leucine, valine and isoleucine decreased the lipopeptide bioproduction. Using a 45-litre bioreactor system for upscaling in batch culture, lipopeptide titers of about 140 mg/L surfactin, 620 mg/L iturin A, and 45 mg/L fengycin were achieved. In conclusion, it becomes clear that B. velezensis UTB96 is a promising strain for further research application in the field of agricultural biological controls of fungal diseases.
Antioxidant availability trades off with warning signals and toxin sequestration in the large milkweed bug (Oncopeltus fasciatus)
(2023) Heyworth, H. Cecilia; Pokharel, Prayan; Blount, Jonathan D.; Mitchell, Christopher; Petschenka, Georg; Rowland, Hannah M.
In some aposematic species the conspicuousness of an individual's warning signal and the concentration of its chemical defense are positively correlated. Several mechanisms have been proposed to explain this phenomenon, including resource allocation trade‐offs where the same limiting resource is needed to produce both the warning signal and chemical defense. Here, the large milkweed bug (Oncopeltus fasciatus: Heteroptera, Lygaeinae) was used to test whether allocation of antioxidants, that can impart color, trade against their availability to prevent self‐damage caused by toxin sequestration. We investigated if (i) the sequestration of cardenolides is associated with costs in the form of changes in oxidative state; and (ii) oxidative state can affect the capacity of individuals to produce warning signals. We reared milkweed bugs on artificial diets with increasing quantities of cardenolides and examined how this affected signal quality (brightness and chroma) across different instars. We then related the expression of warning colors to the quantity of sequestered cardenolides and indicators of oxidative state—oxidative lipid damage (malondialdehyde), and two antioxidants: total superoxide dismutase and total glutathione. Bugs that sequestered more cardenolides had significantly lower levels of the antioxidant glutathione, and bugs with less total glutathione had less luminant orange warning signals and reduced chroma of their black patches compared to bugs with more glutathione. Bugs that sequestered more cardenolides also had reduced red–green chroma of their black patches that was unrelated to oxidative state. Our results give tentative support for a physiological cost of sequestration in milkweed bugs and a mechanistic link between antioxidant availability, sequestration, and warning signals.
Kann die Saatgutbehandlung mit dem Safener Cyprosulfamid die Verträglichkeit von Isoxaflutole in Mais steigern, die Unkrautbekämpfung verbessern und die Wirkstoffmenge verringern?
(2020) Gerhards, Roland; Santel, Hans-Joachim
Herbizide Wirkstoffe werden in kommerziellen Produkten manchmal mit Safenern kombiniert, um die Verträglichkeit des Herbizids für die Kulturpflanze zu gewährleisten. Dabei regen Safener meist die Metabolisierung von Herbiziden in der Kulturpflanze an. Das Herbizid Isoxaflutole (IFT) wird in Mais mit dem Safener Cyprosulfamid (CSA) als Co-Formulierung angewendet. In dieser Arbeit wurde untersucht, ob CSA auch zeitlich getrennt von IFT als Saatgutbehandlung den Mais vor Herbizidschäden durch IFT schützen kann und ob die Unkrautbekämpfung in diesem Fall höher ist als bei der Co-Formulierung, weil die Unkräuter durch die Saatbehandlung nicht mit CSA in Kontakt kommen. Es wurden von 2016–2018 insgesamt fünf Topfversuche als randomisierte, vollständige Blockanlage mit 15 Wiederholungen durchgeführt. Dabei wurde IFT ohne CSA, mit CSA als Co-Formulierung und mit CSA-Beize in der einfachen und doppelten Feldaufwandmenge im 2‑Blatt-Stadium von Mais appliziert und 28 Tage nach der Applikation die Herbizidschäden an Mais und Unkräutern bonitiert und die Sprosslänge und Trockenmasse der Maisstängel gemessen. In allen Versuchen reagierte Mais sensibel mit Bleichungen an den Blättern auf IFT mit bis zu 62 % Schäden. Die Kombination von IFT und CSA reduzierte den vom Herbizid verursachten Schaden signifikant. Die schützende Wirkung von CSA war stärker, wenn der Safener simultan mit dem Herbzid gespritzt wurde (5–10 % Schaden) als bei Beizanwendung (15–25 % Schaden). Im Mittel aller Versuche war die Sprosslänge des mit der der Co-Formulierung von IFT und CSA behandelten Maises auf dem Niveau der unbehandelten Kontrolle und höher als in den IFT-Behandlungen. Die Beizvariante mit 100 g/ha IFT zeigte die längsten Sprosse. Der Safener konnte die herbizidbedingte Reduktion der Trockenmassebildung nur teilweise verhindern. Die Behandlungen mit IFT ohne Zusatz des Safeners zeigten die niedrigsten Sprossmassen der Maisstängel. Die Bekämpfung von Amaranthus retroflexus, Echinochloa crus-galli und Setaria viridis gelang in allen Behandlungen zu 100 %. Nur gegen Stellaria media war die Bekämpfung ohne Safener besser als mit CSA-Beize (92 % Bekämpfungsrate) und Co-Formulierung (79 %). Mit der Saatgutbeizung können ca. 80 % des Safeners gegenüber der Co-Formulierung eingespart werden.
Camera-guided weed hoeing in winter cereals with narrow row distance
(2020) Gerhards, Roland; Kollenda, Benjamin; Machleb, Jannis; Möller, Kurt; Butz, Andreas; Reiser, David; Griegentrog, Hans-Werner
Farmers are facing severe problems with weed competition in cereal crops. Grass-weeds and perennial weed species became more abundant in Europe mainly due to high percentages of cereal crops in cropping systems and reduced tillage practices combined with continuous applications of herbicides with the same mode of action. Several weed populations have evolved resistance to herbicides. Precision weed hoeing may help to overcome these problems. So far, weed hoeing in cereals was restricted to cropping practices with row distances of more than 200 mm. Hoeing in cereals with conventional row distances of 125–170 mm requires the development of automatic steering systems. The objective of this project was to develop a new automatic guidance system for inter-row hoeing using camera-based row detection and automatic side-shift control. Six field studies were conducted in winter wheat to investigate accuracy, weed control efficacy and crop yields of this new hoeing technology. A three-meter prototype and a 6-meter segmented hoe were built and tested at three different speeds in 150 mm seeded winter wheat. The maximum lateral offset from the row center was 22.53 mm for the 3 m wide hoe and 18.42 mm for the 6 m wide hoe. Camera-guided hoeing resulted in 72–96% inter-row and 21–91% intra-row weed control efficacy (WCE). Weed control was 7–15% higher at 8 km h−1 compared to 4 km h−1. WCE could be increased by 14–22% when hoeing was combined with weed harrowing. Grain yields after camera-guided hoeing at 8 km h−1 were 15–76% higher than the untreated control plots and amounted the same level as the weed-free herbicide plots. The study characterizes camera-guided hoeing in cereals as a robust and effective method of weed control.
Peronospora aquilegiicola made its way to Germany: The start of a new pandemic?
(2020) Thines, Marco; Buaya, Anthony; Ali, Tahir; Brand, Thomas
Peronospora aquilegiicola is a destructive pathogen of columbines and has wiped out most Aquilegia cultivars in several private and public gardens throughout Britain. The pathogen, which is native to East Asia was noticed in England and Wales in 2013 and quickly spread through the country, probably by infested plants or seeds. To our knowledge, the pathogen has so far not been reported from other parts of Europe. Here, we report the emergence of the pathogen in the northwest of Germany, based on morphological and phylogenetic evidence. As the pathogen was found in a garden in which no new columbines had been planted recently, we assume that the pathogen has already spread from its original point of introduction in Germany. This calls for an increased attention to the further spread of the pathogen and the eradication of infection spots to avoid the spread to naturally occurring columbines in Germany and to prevent another downy mildew from becoming a global threat, like Peronospora belbahrii and Plasmopara destructor, the downy mildews of basil and balsamines, respectively.
Weed control in a pesticide‐free farming system with mineral fertilisers
(2023) Saile, Marcus; Spaeth, Michael; Schwarz, Jürgen; Bahrs, Enno; Claß‐Mahler, Ingrid; Gerhards, Roland
Negative impacts of pesticides on the environment and human health, the risk of pesticide residues in the food chain, and the problems with herbicide‐resistant weed biotypes support the need for alternative cropping systems. The objective of this study was to investigate weed populations, weed management and crop yield in a pesticide‐free cropping system with the use of mineral fertilisers. Conventional‐, organic‐ and mineral‐ecological cropping systems (MECS) with 6‐year crop rotations including winter wheat, maize, winter triticale or winter rye, soyabean or spring pea, and spring barley were established in a randomised complete strip plot design with four repetitions. Experiments were conducted at four locations in Germany. Preventive and sensor‐guided mechanical weed management strategies were applied in all crops in the organic system and in MECS. Herbicide were applied in the conventional farming system. Weed densities, weed species composition, weed control efficacy (WCE) and crop yield were analysed over 2 years in 2020 and 2021. Conventional farming had the highest WCE and 1–7 weeds m−2 (2.7% weed coverage) after herbicide application. In the organic cropping system and MECS, up to 27 weeds m−2 were counted after camera‐guided weed hoeing. Weed coverage in MECS (9.7%) was higher than in the organic cropping system with 7.7%. Crop yield in MECS was equal to the conventional farming system and 20% higher yield than in the organic farming system. MECS represents a promising new and productive cropping practice if an effective integrated weed management strategy is applied.

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